MYRTACEAE OMICS

Myrtle Rust

This page is linked with the datapaper Soewarto, J., Hamelin, C., Bocs, S., Mournet, P., Vignes, H., Berger, A., . . . Maggia, L. (2019). Transcriptome data from three endemic Myrtaceae species from New Caledonia displaying contrasting responses to myrtle rust (Austropuccinia psidii). Data in Brief, 22, 794-811. doi:10.1016/j.dib.2018.12.080

For more information on the subject: Soewarto, J., Carriconde, F., Hugot, N., Bocs, S., Hamelin, C., & Maggia, L. (2017). Impact of Austropuccinia psidii in New Caledonia, a biodiversity hotspot. Forest Pathology, 48(2). doi:10.1111/efp.12402

For now it can display 5 jbrowses from 4 species : Arillastrum gummiferum (ARIGU), Eucalyptus grandis (EUCGR), Tristaniopsis glauca* (TRIGL-BDS, TRIGL-FAR) and Syzygium longifolium (SYZLO).

The VCF files used for the jbrowses tracks are available on dowloading provided you are logged.
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* For this species data were taken from 2 locations FAR (Farino) and BDS (Bois du sud) and there is one jbrowse for each location